Insertion junction: CLIP2.048023_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048023
Chromosome:chromosome 7
Location:2669707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330750 PHC43 Putative pherophorin-chlamydomonas homolog; (1 of 1) IPR006311//IPR024616 - Twin-arginine translocation pathway, signal sequence // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGAAGTTGAAGCACACTTTGTAGTTGCCGTTTGGCAGGGTCTCCTCAG
Internal bar code:TTAATCTTAGCTAGTATGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1654
LEAP-Seq percent confirming:45.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCTCCTTTGACACCGA
Suggested primer 2:TTGCCCACAGAGAACTCGTC