Insertion junction: CLIP2.048026_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048026
Chromosome:chromosome 2
Location:7192993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00137361

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCTCTGTATGTGTCCCCCAACCGTACCAATAGCAAAAACTAGCATCC
Internal bar code:CGGAATGTTTACCCAGCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3992
LEAP-Seq percent confirming:66.9492
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:118

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGGTGTTGGGTTTGGGT
Suggested primer 2:CTTAAGCCAGCATTGACGGC