Insertion junction: CLIP2.048027_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048027
Chromosome:chromosome 12
Location:9511895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540350 RCD2 Rcd1-like protein; (1 of 2) K12606 - CCR4-NOT transcription complex subunit 9 (RCD1, CNOT9, CAF40) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTGGCTCATCCAGCCCCAAACGCGCGACCAGGCACTTCTCGAGCTCA
Internal bar code:GTTGGGTTAGGTGCTCTATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGAGGAAGACGGGGAGGT
Suggested primer 2:AAGCACAGCCACTAGGACAC