Insertion junction: CLIP2.048033_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048033
Chromosome:chromosome 2
Location:853566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078885 (1 of 2) PTHR10997//PTHR10997:SF7 - IMPORTIN-7, 8, 11 // IMPORTIN-11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGCAGTCGGCGGCCAAAGGGCGGGGGGCACGGGGTAAGTAGAGGACT
Internal bar code:GCTTGGAGGGGACTTAAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:350
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCAGCCACGTCACTCTT
Suggested primer 2:GGTGAGGTAGGTATCGCGTG