Insertion junction: CLIP2.048033_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048033
Chromosome:chromosome 2
Location:853616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078885 (1 of 2) PTHR10997//PTHR10997:SF7 - IMPORTIN-7, 8, 11 // IMPORTIN-11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGGCTGCTCATCGGCGTGATGGGCAGCAAGAGCTACAAGGGGCAGG
Internal bar code:GCTTGGAGGGGACTTAAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGGTAGGTATCGCGTG
Suggested primer 2:CTGTCAGCCACGTCACTCTT