Insertion junction: CLIP2.048034_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048034
Chromosome:chromosome 16
Location:6500085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674750 (1 of 2) PF01857 - Retinoblastoma-associated protein B domain (RB_B) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGGCAGCCGCAGCTTGAGCGCCTTGCCCACGCTGTACAGGCTGCGGG
Internal bar code:TCAGCGTCCCACTTCTAATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3554
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACCCGCCTGTCAGTGAC
Suggested primer 2:GGGTTCTCTTCGCCACTTGA