Insertion junction: CLIP2.048036_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048036
Chromosome:chromosome 9
Location:3071401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393991 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAACCTACTGGGAAAGGGCGGCAATGCGTTTAGTGTTGAATGATACA
Internal bar code:AATTGGGTCCGGTCAGCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3213
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAAAAACATTGCCGCGA
Suggested primer 2:GCCACATATGTTGCAGAGCG