Insertion junction: CLIP2.048036_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048036
Chromosome:chromosome 9
Location:3071408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393991 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGAGATAAACTGACTGAGCACGGTGTTCTCTTGCGCTCACCGTGCAG
Internal bar code:AATTGGGTCCGGTCAGCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACATATGTTGCAGAGCG
Suggested primer 2:CCTGAAAAACATTGCCGCGA