Insertion junction: CLIP2.048038_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048038
Chromosome:chromosome 10
Location:371096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTCCGGGAGGGCCCTCACGCCTAGGCGTCTGCATTGCCGCCATGGAA
Internal bar code:ACTAGTTATGTATTGCAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTCAGCACGTCTTCCC
Suggested primer 2:CGACGAGGACGGAATAGTGG