Insertion junction: CLIP2.048038_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048038
Chromosome:chromosome 10
Location:371110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGGCCGGCGCCACAGCCGCATCAGCCCCGCCCGCCACGGCCTCCAGC
Internal bar code:ACTAGTTATGTATTGCAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGAGGACGGAATAGTGG
Suggested primer 2:TTGAGTCAGCACGTCTTCCC