Insertion junction: CLIP2.048041_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048041
Chromosome:chromosome 16
Location:5512308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682350 (1 of 1) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACAGCGCCTGCGTGATGTACCCCCGCCAGCAGTCCTTGCAGAAGTAG
Internal bar code:CCAAAAGCAAAGTCGTCGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2296
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACAAGGTCCTGCCCAAG
Suggested primer 2:TGCGGCTGTTTGATCAGTCT