Insertion junction: CLIP2.048042_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048042
Chromosome:chromosome 16
Location:6681504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGATGCTGACGCTGCAGTCCGGCCAAGCCCCCGACGCCGACCAGGTC
Internal bar code:ATACGGAGTGGTCTGAGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGGTTGGCAGGAATAG
Suggested primer 2:AGCAACAACAGCAGCATGTG