Insertion junction: CLIP2.048042_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048042
Chromosome:chromosome 16
Location:6681511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCTGGCGCCGCAGGAGCTGCTTCTCCGCCAGGCAGCCCTGTGTGTG
Internal bar code:TAGCACCGAGGATGCTAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACAACAGCAGCATGTG
Suggested primer 2:TCGCTGGTTGGCAGGAATAG