Insertion junction: CLIP2.048044_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048044
Chromosome:chromosome 14
Location:429852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610647 (1 of 3) PF02209 - Villin headpiece domain (VHP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAAGGAGGCAGGCGGACGGGCCTGGGAAAGCAAGGGCGGGTGGGGGT
Internal bar code:AGGCCAACTTAGGTTTGTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCACCATCATCACAGGT
Suggested primer 2:TTGCTTTGGTTGCTGTTCCG