Insertion junction: CLIP2.048046_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048046
Chromosome:chromosome 3
Location:265106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144364 (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTCGAATTCTGACCTCCGGACAAAGGCACACGCCAAGACTTAACCCA
Internal bar code:CCCGTTGAGCAACGGAGACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2029
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGAGCAGCTTCTAGGG
Suggested primer 2:GGGCATCGTGCTTGCATAAG