Insertion junction: CLIP2.048047_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048047
Chromosome:chromosome 16
Location:6229787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152018

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACAGGCCCAACACACTCAGTCAGCCATACAAGTTAGCTCAGCAAACA
Internal bar code:CAATACCGAGGGTGTTCAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCATTCATCGGACACG
Suggested primer 2:TATTAGGTTACGCGGCGGAC