Insertion junction: CLIP2.048048_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048048
Chromosome:chromosome 8
Location:3938107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382200 (1 of 4) PTHR11584//PTHR11584:SF377 - SERINE/THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTTCGTGGTCCGGCGCCGAAATCAGGTCGGCAAGCCGGGCCACAGCC
Internal bar code:TGCCACAGGTAACGACTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2663
LEAP-Seq percent confirming:96.0526
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACTCTGTTTGCAGTGC
Suggested primer 2:CAGGTAGAAATGGGCGGGTT