Insertion junction: CLIP2.048053_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048053
Chromosome:plastome
Location:168658
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAACCCCTTCGGAGTAGTAAAATAGGCAGTGGCGGTACCACTGCCAC
Internal bar code:CCCCGGATACATTTTCCCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:57.6923
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTTAGGGGAAGGGGAGA
Suggested primer 2:GCGGTACCACTGCCACTAAT