Insertion junction: CLIP2.048054_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048054
Chromosome:chromosome 6
Location:3149268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275800 HTB31,HTB4,HTB3 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCAAGGCCATGTCCATCATGAACAGCTTCATCAACGACATCTTTG
Internal bar code:AGGGCGAGCTTAAGATGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3480
LEAP-Seq percent confirming:95.8904
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACAGTACCACCCTGGC
Suggested primer 2:GTTGGGTCAAACAACCGCTC