Insertion junction: CLIP2.048056_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048056
Chromosome:chromosome 6
Location:2961677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273650 (1 of 3) 1.11.2.3 - Plant seed peroxygenase / Soybean peroxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCGTACTCGCCTGGGCGGTAGACCTCGTTCATCGTTGCGTTATTAGC
Internal bar code:TGGTTTATATACCTGAACAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1368
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCAGTCCGGACGAAAA
Suggested primer 2:TGCTCACCCACATACGTGTC