Insertion junction: CLIP2.048057_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048057
Chromosome:chromosome 13
Location:4921147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605500 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTACACCCCCTAAATCCCCTCTGGTTGTTTCCAGGATGGTGCCAAACG
Internal bar code:CCGTTTCGGCCAATAACATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:614
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCTGGTACAAGTACGGC
Suggested primer 2:GTGGGATCGATAGGGTGCAG