Insertion junction: CLIP2.048059_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048059
Chromosome:chromosome 17
Location:1826776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709400 (1 of 1) PTHR12894//PTHR12894:SF17 - CNH DOMAIN CONTAINING // TRANSFORMING GROWTH FACTOR-BETA RECEPTOR-ASSOCIATED PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGGAGTGTGTTCATGCAATGTCGCGGTGACGAGATAACGTCTGGAA
Internal bar code:ATTGACGGATTTTGCTGGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGTCTCAAACAGCCGCA
Suggested primer 2:ACACGCTCACATACCCGTTT