Insertion junction: CLIP2.048067_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048067
Chromosome:chromosome 8
Location:3206995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376740 (1 of 1) IPR008979//IPR018392 - Galactose-binding domain-like // LysM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACTGGTGGGTGCGCACGTGTGTGTGCAGGTTTTGCGTGTGTTAGGC
Internal bar code:TGCCCTTTGGTTCATGTTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATCTCTTCCTCCCATC
Suggested primer 2:TTGCATCTGTGTGTTGTGCG