Insertion junction: CLIP2.048071_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048071
Chromosome:chromosome 3
Location:4326160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174476 CYCC1 C-type cyclin; (1 of 1) K15161 - cyclin C (CCNC, SSN8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCAGGATCAGACCTCGGGGGAGGGCTGAGAGCCCGGCGGAGTCAGGG
Internal bar code:TCACGCGTAGCCGTTCCTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2313
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AACATGCCCATTACCCCAGG
Suggested primer 2:GGATGAGCATGAGGTCTCGG