Insertion junction: CLIP2.048075_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048075
Chromosome:chromosome 10
Location:524568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801102 (1 of 1) PTHR19297//PTHR19297:SF111 - GLYCOSYLTRANSFERASE 14 FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTTCGCTTCCTGCCTGCATGTCCGCGCCCGCCCTTCCACTTTTCCAC
Internal bar code:TAGACGTCTTATTTTTTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1235
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGCTGAAATGATTGGGC
Suggested primer 2:TGCACAATGGAATGGCGTTG