Insertion junction: CLIP2.048083_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048083
Chromosome:chromosome 6
Location:8678651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310100 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACTCCTGTGTGGTAGCATGTTGACAGCTGTAAACCGCTGCCCGCCCA
Internal bar code:CGGACATCGCGGGCTTCGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2814
LEAP-Seq percent confirming:52.9412
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCCTACCGAAATCCCG
Suggested primer 2:GATGGTCATGAAGAACGCGC