Insertion junction: CLIP2.048087_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048087
Chromosome:chromosome 7
Location:5013246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCATCGTCCAACGCAGCCTCCCAGTTGTTCCATCGCAGGCATAGTGC
Internal bar code:ACTGATAGACTGGTGGATGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2637
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGCTTCGCCATTGTC
Suggested primer 2:GTAAACCACGCCCTCATCCA