Insertion junction: CLIP2.048095_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048095
Chromosome:chromosome 1
Location:4606903
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g031800 (1 of 1) PTHR23083//PTHR23083:SF433 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGACGCGTTGTACATGTGCTTCGGCATTCTGCAGACAGGTGCCTAG
Internal bar code:TGGGTGTCACTTGAGCACATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:11.9565
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTCCCTACTCTTGCCCT
Suggested primer 2:CAACAAAGCAAACGCTCCGA