Insertion junction: CLIP2.048103_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048103
Chromosome:chromosome 13
Location:1812874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575101 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR
Cre13.g801523 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACGAGAAATGCATTAGCGATGAAGGCAACGTTTTACTTGAGAATATG
Internal bar code:TGTTCCCGCTAGCTAATAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCTGTTGCTGGTAGAAG
Suggested primer 2:CAAGTGAGAGCCCTGTCGTT