Insertion junction: CLIP2.048110_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048110
Chromosome:chromosome 11
Location:4140503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGCGGCGCAGAGGGAGGGGTGGCAGTGGCACGGGTGGAACCAGAGG
Internal bar code:TCTACGGATCCGATTCCGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3750
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCTTCTGCAGCCATCA
Suggested primer 2:CGTCATGCGCTAAAGACAGC