Insertion junction: CLIP2.048125_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048125
Chromosome:chromosome 2
Location:5389989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGTGGGATAGGGGCGCGGGGCTTGTGGCGGCAGCATTCCTCCTCCGA
Internal bar code:GGTATTAGTTTTACCAGTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2012
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCAGCGCAGTGTTCAAGC
Suggested primer 2:GCACGTGTTCCAAACCCTTC