Insertion junction: CLIP2.048130_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048130
Chromosome:chromosome 9
Location:3366671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395584 (1 of 139) IPR011011 - Zinc finger, FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGGGAAGGGCCACCTGCACCTGCCCCTGCTCCTGCCCATGACCGTAA
Internal bar code:AGTTCCGGATAGTCGTGTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1616
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCACCAACACCATGG
Suggested primer 2:CGTATTCGAGCGAGTCCGAA