Insertion junction: CLIP2.048132_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048132
Chromosome:chromosome 2
Location:6717194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387430 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR
lncRNA_TCONS_00136874 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAAAGTGTAGCGCCCTCAGCCTTGTTTCACAGCACAGCAACACCTGA
Internal bar code:ATTTGAGTAGATCGTAAAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1987
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCCGTAACTGTCAACCA
Suggested primer 2:ATTGTTCTCCAGGCTGTCGG