Insertion junction: CLIP2.048134_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048134
Chromosome:chromosome 6
Location:6463495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293900 (1 of 1) PTHR23333:SF4 - UBX DOMAIN-CONTAINING PROTEIN 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCTCGTCAGTATGCTTACATTGCTGGACGGCACGGCGCCCTGTATC
Internal bar code:ATAACGTTTATGGGGGGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1773
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCATCCTCGATCAGCGC
Suggested primer 2:CCACCATTGCAATCGCGTAG