Insertion junction: CLIP2.048134_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048134
Chromosome:chromosome 6
Location:6463503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293900 (1 of 1) PTHR23333:SF4 - UBX DOMAIN-CONTAINING PROTEIN 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGGGACGGTAGTTGAAGCTTGAGGCGCCCCGTTTCAGTGTCCAACC
Internal bar code:ATAACGTTTATGGGGGGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCATTGCAATCGCGTAG
Suggested primer 2:TTCTCATCCTCGATCAGCGC