Insertion junction: CLIP2.048142_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048142
Chromosome:chromosome 12
Location:2223597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508853 BPL2 Biotin-protein ligase; (1 of 41) PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCGCGTCCGCCTCTGCCGCCGTCACCTGCGCCACCTGCGCCCCAGC
Internal bar code:TGCACACAGCCTGTTTTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2135
LEAP-Seq percent confirming:57.5758
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGTAGGCGAGGAACTA
Suggested primer 2:CACATTGCTGCTGTTGCTGT