Insertion junction: CLIP2.048152_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048152
Chromosome:chromosome 6
Location:2879387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800648 (1 of 2) PTHR33033//PTHR33033:SF11 - FAMILY NOT NAMED // RNASE H DOMAIN-CONTAINING PROTEIN intron
Cre06.g800649 (1 of 2) PTHR33033//PTHR33033:SF11 - FAMILY NOT NAMED // RNASE H DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGCACCTTTCCTGCGCTTGCGGCCGCGTGCGGGGCTGTACTAACGGC
Internal bar code:GGGGGACTCTTCGGAAATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCAAGAACCCTGTGTG
Suggested primer 2:TCTGCTTCTCCGTTGCCATT