Insertion junction: CLIP2.048154_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048154
Chromosome:chromosome 2
Location:3306443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097650 RPN6 (1 of 1) K03036 - 26S proteasome regulatory subunit N6 (PSMD11, RPN6); 26S proteasome regulatory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCCAGCTACTCCACGCGCCGCACCACAGCCGGCCCACACCAGGCACA
Internal bar code:TATGTTTATTTTATTGGCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACGCAAGATGCAGCATC
Suggested primer 2:CCTCCACCTTTCAACGACGA