Insertion junction: CLIP2.048154_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048154
Chromosome:chromosome 6
Location:4659386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278451 PDK2 Pyruvate dehydrogenase kinase; (1 of 2) 2.7.11.2 - [Pyruvate dehydrogenase (acetyl-transferring)] kinase / Pyruvate dehydrogenase kinase (phosphorylating) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTTAGGCTGGCCACCAAGTGATTGTCGGTTGGCATTGTGTTCCCACG
Internal bar code:GAGGTGGCTATCCGTGACCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2739
LEAP-Seq percent confirming:75.4098
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGTGTTTGAGTTGGTG
Suggested primer 2:ACCTCGCACACTAATGCACA