Insertion junction: CLIP2.048154_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048154
Chromosome:chromosome 6
Location:4659389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278451 PDK2 Pyruvate dehydrogenase kinase; (1 of 2) 2.7.11.2 - [Pyruvate dehydrogenase (acetyl-transferring)] kinase / Pyruvate dehydrogenase kinase (phosphorylating) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTGGACATCCCCACTGCTTGCATGTCGGCGACACGCTCTCCCCTCGC
Internal bar code:GACAGTTTACTGAGAGTCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2808
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCGCACACTAATGCACA
Suggested primer 2:CGCAGGTGTTTGAGTTGGTG