Insertion junction: CLIP2.048166_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048166
Chromosome:chromosome 7
Location:3595737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336850 (1 of 3) PF01661 - Macro domain (Macro) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATGTGTAAAATACCAGCGAGCTCGGCACCGGGCCCCCTTGAGACCGT
Internal bar code:AATGTGACATATGTCACAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3861
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCGCATTATGGCACAG
Suggested primer 2:AGGCATGACTACCCGTACCT