Insertion junction: CLIP2.048167_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048167
Chromosome:chromosome 6
Location:2993762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274050 (1 of 1) IPR000313//IPR001965//IPR011011//IPR011124//IPR019787 - PWWP domain // Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, CW-type // Zinc finger, PHD-finger intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCGTCTATGCTTCACCACTGTATACGTTTGTGTATGTGCGCGAATG
Internal bar code:CAAGTGTGTGTTTCAGGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCCCCATCATGCAAGT
Suggested primer 2:GCAAGCGCTACTGCCATAAC