Insertion junction: CLIP2.048173_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048173
Chromosome:chromosome 7
Location:2734103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331250 (1 of 1) IPR008928//IPR012336 - Six-hairpin glycosidase-like // Thioredoxin-like fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGATGGGTTTGTCCTCCGCCACCGCCCGGGCGAACGCCTCCTCGCC
Internal bar code:TAGCATTTTCTTTGCTGTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACAACCGGACAAACACG
Suggested primer 2:AGCGAGTGACAATTCGTGGT