Insertion junction: CLIP2.048173_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048173
Chromosome:chromosome 8
Location:707265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360550 ERM3,NIRK,NIRK1 Copper-containing nitrite reductase, mitochondrial; (1 of 1) 1.7.2.1 - Nitrite reductase (NO-forming) / Pseudomonas cytochrome oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAATCCGCCCACGCACCCACACCCACCTTGGTCTCGCCCTCCTCCGCGT
Internal bar code:TCCGTTCTTGTTCCTAATGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3008
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGGCTTGCGTATGGAT
Suggested primer 2:ATGCCGTACCTGTATGCGAG