Insertion junction: CLIP2.048175_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048175
Chromosome:chromosome 12
Location:6289217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536600 FAP78 Flagellar Associated Protein 78; (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACATGGACATGAGGAAGACGAGAGCCACGTCGTTGGGGGAGGTCATG
Internal bar code:GCCCCCGCAGCGGGAGTAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:412
LEAP-Seq percent confirming:42.5926
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTTGTGTGTTGCGGAAC
Suggested primer 2:TGTTGCGTGCCTTTGCTTAC