Insertion junction: CLIP2.048176_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048176
Chromosome:chromosome 12
Location:2395321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507750 (1 of 1) PF00069//PF07714//PF13637 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTCCCCCCGCTCCCTACCCCTCAGCTCCTTCCAAGCCTCCTCCCCG
Internal bar code:GGCAGGTAACAGTAGTACCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGATCGGTGAGAGCGG
Suggested primer 2:TACTGACACAACAGCCACCC