Insertion junction: CLIP2.048179_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048179
Chromosome:chromosome 2
Location:3348366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098000 EBM2 (1 of 4) K19355 - mannan endo-1,4-beta-mannosidase (MAN); Mannan endo-1%252C4-beta-mannosidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTAAGTCGGCTGCTGTGTGCCCTTGCATGACAGGTAACGCGGAGCCGC
Internal bar code:AAGTTGACTTTGGAGTGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCGTCTCATCATAGCCG
Suggested primer 2:ACCACAGTAGCAGTGCACTC