Insertion junction: CLIP2.048181_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048181
Chromosome:chromosome 7
Location:5008590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347400 (1 of 2) K11135 - Pin2-interacting protein X1 (PINX1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGGCACGTCATGGCACGCACACGCAAGCGCAGCAAGAGCAAGCACA
Internal bar code:AGTGCTGGGTATTACTGTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3791
LEAP-Seq percent confirming:27.2
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:91
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGGTTACCAGGGCGAG
Suggested primer 2:CGACGAGGAGGATGAAGAGC