Insertion junction: CLIP2.048186_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048186
Chromosome:chromosome 7
Location:3251198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334300 TRP6 Transient receptor potential ion channel protein; (1 of 2) PTHR22847//PTHR22847:SF442 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTAACGCCGATGCAGTCCAGCGGCTGCAACGTTCGCGTCATGCGACT
Internal bar code:CCTAATGTTACATGACAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2913
LEAP-Seq percent confirming:96.1039
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGAGAGGCCGTCAAATA
Suggested primer 2:GAGAAGGGTTTCGGAGGTGG