Insertion junction: CLIP2.048187_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048187
Chromosome:chromosome 12
Location:4099801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801401 (1 of 6) 2.7.7.49 - RNA-directed DNA polymerase / Revertase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGATGGGCGTAGAGGTGGGCACGATGTGCATGCAGGGTGATAATCAG
Internal bar code:AGGGTGATGGACAGTTCAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1141
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGTCTCGCTACGCACAG
Suggested primer 2:GGAGAAATTCGGCATGACGC